Services for the European Open Science Cloud

Apache

ECAS Training Repositories

Repository for training/demo materials

Jupyterhub Deployment - hands-on training

Jupyter provides a powerful environment for expressing research ideas as notebooks, where code, test and visualizations are easily combined together on an interactive web-frontend. JupyterHub allows to deploy a multi-user service where users can store and run their own notebooks without the need of installing anything on their computers. This is the technology behind the EGI Notebooks service and other similar Jupyter-based services for research.

In this training we will demonstrate how to deploy a JupyterHub instance for your users on top of Kubernetes and explore some of the possible customisations that can improve the service towards your users like integration with authentication services or with external storage systems. After this training, the attendees will be able to deploy their own instance of JupyterHub on their facilities.

Target audience: Resource Center/e-Infrastructure operators willing to provide Jupyter environment for their users.

Pre-requisites: basic knowledge of command-line interface on Linux.

Digital Forensics for SSC Solvers

In the hands-on session, the participants will be provided with a VM infected with the 'malware' used in SSC-19.03. They will then be guided through the methods necessary to solve the challenges built into the simulated attack

CompBio Webinar

The main objective of this webinar is to show how the CompBioMed community can use the EOSC services for managing active research data (i.e. data transfer, storage, and sharing) and for preserving final research data (i.e. data archiving and publishing). In this webinar, we give a brief overview of the EUDAT Services and the data life cycle. We further demonstrate how these services operate and integrate with each other to meet the data management requirements of research communities and comply with the FAIR principles – which require the data to be properly documented, annotated, archived, published and accessible to the wider community.

Target audience: community researchers, data managers and the IT support people.

Presentation by Dr Narges Zarrabi (SURFsara, narges.zarrabi@surfsara.nl)

An EOSC-hub proposal for the EOSC Service Management System

This webinar will introduce the Service Management System based on the FitSM standard for IT Service Management developed and deployed by EOSC-hub for EOSC, with a particular focus on the Service Portfolio Management as a key and highly strategic process. The structure of the EOSC Service Portfolios will be also presented.

An EOSC-hub proposal for the EOSC Technical Architecture

This webinar will describe the Reference Technical Architecture for EOSC proposed by EOSC-hub during the recent EOSC-hub Technical Workshop.

The proposed architecture is based on the concepts of service composability and interoperability. Service categories and relationships between them will be presented. The process to define interoperability guidelines for different technical areas will be also depicted.

Who should attend:

Service providers, Users, members of other EOSC implementation projects including EOSC cluster projects, members of EOSC working groups, European and national e-infrastructures, European and national research infrastructures

Key Takeaways for attendees

  • EOSC Technical Reference architecture proposed by EOSC-hub
  • Classification of services within EOSC
  • Status of the EOSC-hub work to define interoperability guidelines for EOSC macro-features (Federating core, AAI, Cloud and Container computing, FAIR data management, etc.)

How to apply bioinformatics to metallo-proteins

Table of Contents

• Sequence patterns and protein domains
• MetalPDB and related tools
• Structural Databases
• Structure refinement and protein dynamics

OPENCoastS platform video tutorial

This video tutorial shows how to use this simple service to create coastal forecast systems.
Access at: https://opencoasts.ncg.ingrid.pt/

OPENCoastS user manual

OPENCoastS is an online service (https://opencoasts.ncg.ingrid.pt/) that assembles on-demand circulation forecast systems for selected coastal areas and keeps them running operationally for a period defined by the user. This service generates daily forecasts of water levels and vertically averaged velocities over the region of interest for 48 hours, based on numerical simulations of all relevant physical processes. Presently, all forecasts are made with the model SCHISM (http://ccrm.vims.edu/schismweb/) and are supported by the computational resources from INCD - Infraestrutura Nacional de Computação Distríbuida (https://www.incd.pt), a node of the EGI - European Grid Infrastructure (https://www.egi.eu). Access to the service is granted through a registration procedure, and is obtained after acceptance of the registration by the OPENCoastS user support. OPENCoastS is jointly developed and maintained by LNEC - Laboratório Nacional de Engenharia Civil (LNEC - http://www.lnec.pt), LIP - Laboratório de Instrumentação e Física Experimental de Partículas (LIP - https://www.lip.pt), CNRS-LIENS - Centre National De La Recherche Scientifique - LIttoral ENvironnement et Sociétés (CNRS-LIENS - https://lienss.univ-larochelle.fr) and Universidad de Cantabria (UC - https://web.unican.es).

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